Publications

2019
Sanchez T, Zhang M, Needleman D, Seli E. Metabolic imaging via fluorescence lifetime imaging microscopy for egg and embryo assessment. Fertility and Sterility [Internet]. 2019;111 (2) :212 - 218. Publisher's VersionAbstract
Current strategies for embryo assessment in the assisted reproductive technology laboratories rely primarily on morphologic parameters that have limited accuracy for determining embryo viability. Even with the addition of invasive diagnostic interventions such as preimplantation genetic testing for aneuploidy alone or in combination with mitochondrial DNA copy number assessment, at least one third of embryos fail to implant. Therefore, at a time when the clinical benefits of single ET are widely accepted, improving viability assessment of embryos is ever more important. Building on the previous work demonstrating the importance of metabolic state in oocytes and embryos, metabolic imaging via fluorescence lifetime imaging microscopy offers new and potentially useful diagnostic method by detecting natural fluorescence of FAD and NADH, the two electron transporters that play a central role in oxidative phosphorylation. Recent studies demonstrate that fluorescence lifetime imaging microscopy can detect oocyte and embryo metabolic function and dysfunction in a multitude of experimental models and provide encouraging evidence for use in scientific investigation and possibly for clinical application.
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Foster PJ, Fürthauer S, Shelley MJ, Needleman DJ. From cytoskeletal assemblies to living materials. Current Opinion in Cell Biology. 2019;56 :109–114. Download Paper
2018
Sanchez T, Wang T, Pedro MV, Zhang M, Esencan E, Sakkas D, Needleman D, Seli E. Metabolic imaging with the use of fluorescence lifetime imaging microscopy (FLIM) accurately detects mitochondrial dysfunction in mouse oocytes. Fertility and sterility. 2018;110 (7) :1271. Download Paper
Yoo TY, Choi J-M, Conway W, Yu C-H, Pappu RV, Needleman DJ. Measuring NDC80 binding reveals the molecular basis of tension-dependent kinetochore-microtubule attachments. eLife [Internet]. 2018 :7:e36392. Publisher's Version Download Paper
Oriola D, Needleman DJ, Brugués J. The Physics of the Metaphase Spindle. Annual review of biophysics. 2018;47 :655–673. Download Paper
Kaye B, Stiehl O, Foster PJ, Shelley M, Needleman DJ, Fürthauer S. Measuring and modeling polymer concentration profiles near spindle boundaries argues that spindle microtubules regulate their own nucleation. New Journal of Physics. 2018. Download Paper
Penfield L, Wysolmerski B, Mauro M, Farhadifar R, Martinez MA, Biggs R, Wu H-Y, Broberg C, Needleman D, Bahmanyar S. Dynein pulling forces counteract lamin-mediated nuclear stability during nuclear envelope repair. Molecular biology of the cell. 2018;29 (7) :852–868. Download Paper
Racowsky C, Needleman DJ. Cumulus cell gene expression as a potential biomarker for oocyte quality. Fertility and Sterility. 2018 :109(3):438-439. Download Paper
Sherman DJ, Xie R, Taylor RJ, George AH, Okuda S, Foster PJ, Needleman DJ, Kahne D. Lipopolysaccharide is transported to the cell surface by a membrane-to-membrane protein bridge. Science [Internet]. 2018;359 (6377) :798–801. Publisher's VersionAbstract
The outer membrane of Gram-negative bacteria is composed of lipopolysaccharide, a large glycolipid that prevents drugs from entering the cells. Disrupting lipopolysaccharide assembly hypersensitizes bacteria to antibiotics. Sherman et al. used biochemical tools to observe lipopolysaccharide transport. Seven proteins, which are conserved in all Gram-negative bacteria, appear to form a protein bridge that uses adenosine triphosphate to power transport of lipopolysaccharide from one membrane to another. The ability to monitor intermembrane transport of lipopolysaccharide will help in efforts to develop and characterize inhibitors.Science, this issue p. 798Gram-negative bacteria have an outer membrane that serves as a barrier to noxious agents in the environment. This protective function is dependent on lipopolysaccharide, a large glycolipid located in the outer leaflet of the outer membrane. Lipopolysaccharide is synthesized at the cytoplasmic membrane and must be transported to the cell surface. To understand this transport process, we reconstituted membrane-to-membrane movement of lipopolysaccharide by incorporating purified inner and outer membrane transport complexes into separate proteoliposomes. Transport involved stable association between the inner and outer membrane proteoliposomes. Our results support a model in which lipopolysaccharide molecules are pushed one after the other in a PEZ dispenser–like manner across a protein bridge that connects the inner and outer membranes.
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Tan R, Foster PJ, Needleman DJ, McKenney RJ. Cooperative accumulation of dynein-dynactin at microtubule minus-ends drives microtubule network reorganization. Developmental Cell. 2018;44 (2) :233–247. Download Paper
2017
Foster PJ, Yan W, Fürthauer S, Shelley M, Needleman DJ. Connecting macroscopic dynamics with microscopic properties in active microtubule network contraction. New Journal of Physics. 2017. Download Paper
Sanchez T, Seidler EA, Gardner DK, Needleman D, Sakkas D. Will noninvasive methods surpass invasive for assessing gametes and embryos?. Fertility and Sterility. 2017;108 (5) :730–737. Download Paper
Nazockdast E, Rahimian A, Needleman D, Shelley M. Cytoplasmic flows as signatures for the mechanics of mitotic positioning. Molecular Biology of the Cell. 2017 :mbc–E16. Download Paper
Needleman D, Dogic Z. Active matter at the interface between materials science and cell biology. Nature Reviews Materials [Internet]. 2017;2 :17048 EP -. Publisher's Version Download Paper
Lewis E, Farhadifar R, Farland LV, Needleman DJ, Missmer SA, Racowsky C. Use of imaging software for assessment of the associations among zona pellucida thickness variation, assisted hatching, and implantation of day 3 embryos. Journal of Assisted Reproduction and Genetics. 2017 :1-9. Download Paper
Hanley ML, Yoo TY, Sonnett M, Needleman DJ, Mitchison TJ. Chromosomal passenger complex hydrodynamics suggests chaperoning of the inactive state by nucleoplasmin/nucleophosmin. Molecular Biology of the Cell. 2017 :mbc–E16. Download Paper
Kaye B, Yoo TY, Foster PJ, Yu C-H, Needleman DJ. Bridging length scales to measure polymer assembly. Mol. Biol. Cell. 2017;28 :1379-1388. Download Paper
Kaye B, Foster PJ, Yoo TY, Needleman DJ. Developing and Testing a Bayesian Analysis of Fluorescence Lifetime Measurements. PLoS ONE. 2017;12 (1) :e0169337. doi:10.1371/journal.pone.0169337. Download Paper
2016
Wu H-Y, Nazockdast E, Shelley MJ, Needleman DJ. Forces positioning the mitotic spindle: Theories, and now experiments. BioEssays [Internet]. 2016 :1600212–n/a. Publisher's Version Download Paper
Oh D, Yu C-H, Needleman D. Spatial organization of the Ran pathway by microtubules in mitosis. Proceedings of the National Academy of Sciences. 2016 :113 (31) 8729-8734. Download

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